Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate kinase | BK654_12175 | Not Available | Positive | 2810505 - 2811023 | 19257.5 |
| 3-dehydroquinate synthase | BK654_12180 | Not Available | Positive | 2811153 - 2812253 | 39816.2 |
| cell division protein | BK654_12185 | Not Available | Positive | 2812264 - 2813850 | 54894.3 |
| glutamate synthase large subunit | BK654_12190 | Not Available | Positive | 2814201 - 2818649 | 162293.0 |
| glutamate synthase | BK654_12195 | Not Available | Positive | 2818683 - 2820101 | 51866.2 |
| uroporphyrinogen decarboxylase | BK654_12200 | Not Available | Positive | 2820355 - 2821422 | 39037.1 |
| n-acetylglucosamine-binding protein gbpa | BK654_12205 | Not Available | Positive | 2821761 - 2823227 | 52402.2 |
| hypothetical protein | BK654_12210 | Not Available | Positive | 2823423 - 2823896 | 16857.4 |
| type ii secretion system protein gspd | BK654_12215 | Not Available | Positive | 2823905 - 2825830 | 69038.4 |
| type ii secretion system protein gspe | BK654_12220 | Not Available | Positive | 2825827 - 2827299 | 53613.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
