Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| primosomal protein n' | BK654_12125 | Not Available | Negative | 2797724 - 2799943 | 81883.2 |
| 50s ribosomal protein l31 | BK654_12130 | Not Available | Positive | 2800233 - 2800457 | 8118.64 |
| nuclease | BK654_12135 | Not Available | Positive | 2800469 - 2801284 | 29379.5 |
| malate dehydrogenase | BK654_12140 | Not Available | Positive | 2801466 - 2802734 | 45227.6 |
| peptidase | BK654_12145 | Not Available | Negative | 2802983 - 2805430 | 89218.3 |
| pilus assembly protein pilm | BK654_12150 | Not Available | Positive | 2805636 - 2806700 | 38178.9 |
| pilus assembly protein piln | BK654_12155 | Not Available | Positive | 2806700 - 2807266 | 21165.5 |
| pilus assembly protein pilp | BK654_12160 | Not Available | Positive | 2807263 - 2807886 | 23191.9 |
| pilus assembly protein pilp | BK654_12165 | Not Available | Positive | 2807883 - 2808428 | 20178.1 |
| fimbrial protein | BK654_12170 | Not Available | Positive | 2808425 - 2810500 | 74689.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
