Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (uracil(1498)-n(3))-methyltransferase | BK654_12020 | Not Available | Negative | 2778390 - 2779097 | 26163.4 |
| twin arginine-targeting protein translocase tatc | BK654_12025 | Not Available | Negative | 2779094 - 2779891 | 29768.2 |
| sec-independent protein translocase tatb | BK654_12030 | Not Available | Negative | 2779888 - 2780310 | 14963.0 |
| sec-independent protein translocase tata | BK654_12035 | Not Available | Negative | 2780321 - 2780608 | 10360.4 |
| phosphoribosyl-atp diphosphatase | BK654_12040 | Not Available | Negative | 2780633 - 2780965 | 11943.1 |
| phosphoribosyl-amp cyclohydrolase | BK654_12045 | Not Available | Negative | 2780958 - 2781356 | 15243.1 |
| ubiquinone biosynthesis regulatory protein kinase ubib | BK654_12050 | Not Available | Negative | 2781438 - 2783042 | 61502.3 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | BK654_12060 | Not Available | Negative | 2783663 - 2784433 | 28375.3 |
| polyhydroxyalkanoic acid system protein | BK654_12065 | Not Available | Positive | 2784589 - 2784864 | 9840.95 |
| poly(3-hydroxyalkanoate) granule-associated protein phai | BK654_12070 | Not Available | Positive | 2785129 - 2785551 | 15442.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
