Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine utilization repressor | BK654_11920 | Not Available | Positive | 2750448 - 2751197 | 27914.5 |
| hypothetical protein | BK654_11925 | Not Available | Positive | 2751194 - 2751763 | 20447.4 |
| urocanate hydratase | BK654_11930 | Not Available | Positive | 2752241 - 2753929 | 61456.1 |
| cytosine permease | BK654_11935 | Not Available | Positive | 2754081 - 2755547 | 51965.3 |
| histidine abc transporter substrate-binding protein | BK654_11940 | Not Available | Positive | 2755618 - 2756586 | 35134.2 |
| abc transporter permease | BK654_11945 | Not Available | Positive | 2756657 - 2757508 | 30730.9 |
| hypothetical protein | BK654_11950 | Not Available | Positive | 2757505 - 2758335 | 30635.3 |
| histidine ammonia-lyase | BK654_11955 | Not Available | Positive | 2758506 - 2760029 | 54141.4 |
| histidine ammonia-lyase | BK654_11960 | Not Available | Positive | 2760158 - 2761690 | 53929.9 |
| imidazolonepropionase | BK654_11965 | Not Available | Positive | 2761801 - 2763003 | 42962.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
