Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycogen phosphorylase | BK654_11870 | Not Available | Positive | 2735741 - 2738191 | 92252.9 |
| hypothetical protein | BK654_11875 | Not Available | Positive | 2738480 - 2742100 | 129798.0 |
| hypothetical protein | BK654_11880 | Not Available | Positive | 2742097 - 2743479 | 49914.2 |
| fructose-bisphosphatase | BK654_11885 | Not Available | Positive | 2743713 - 2744723 | 37117.4 |
| hypothetical protein | BK654_11890 | Not Available | Positive | 2744727 - 2745323 | 22590.9 |
| chemotaxis protein | BK654_11895 | Not Available | Negative | 2745825 - 2747705 | 66612.2 |
| hypothetical protein | BK654_11900 | Not Available | Positive | 2747704 - 2747886 | 6725.33 |
| hypothetical protein | BK654_11905 | Not Available | Positive | 2748002 - 2748256 | 8960.0 |
| lipocalin | BK654_11910 | Not Available | Positive | 2748288 - 2748857 | 21586.8 |
| formimidoylglutamate deiminase | BK654_11915 | Not Available | Negative | 2748979 - 2750343 | 49693.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
