Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazole glycerol phosphate synthase subunit hisf | BK654_11770 | Not Available | Positive | 2715070 - 2715840 | 27224.6 |
| amino acid abc transporter substrate-binding protein | BK654_11775 | Not Available | Positive | 2715904 - 2716650 | 27699.6 |
| hypothetical protein | BK654_11780 | Not Available | Negative | 2716843 - 2717625 | 28263.3 |
| peptidase s41 | BK654_11785 | Not Available | Negative | 2717627 - 2718943 | 46301.6 |
| peptidase m23 | BK654_11790 | Not Available | Negative | 2718976 - 2720268 | 47752.7 |
| phosphoglycerate mutase (2,3-diphosphoglycerate-independent) | BK654_11795 | Not Available | Negative | 2720496 - 2722025 | 55136.4 |
| sulfurtransferase | BK654_11800 | Not Available | Positive | 2722178 - 2722591 | 14459.8 |
| glutaredoxin 3 | BK654_11805 | Not Available | Positive | 2722593 - 2722847 | 9230.18 |
| protein-export chaperone secb | BK654_11810 | Not Available | Positive | 2722887 - 2723369 | 17765.0 |
| trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trml | BK654_11815 | Not Available | Negative | 2723529 - 2723984 | 16916.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
