Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-phe | Not Available | Not Available | Positive | 2706303 - 2706378 | Not Available |
| oxidative damage protection protein | BK654_11725 | Not Available | Negative | 2706481 - 2706753 | 10478.4 |
| a/g-specific adenine glycosylase | BK654_11730 | Not Available | Negative | 2706750 - 2707817 | 39876.1 |
| cell envelope biogenesis protein asma | BK654_11735 | Not Available | Negative | 2707814 - 2710039 | 79816.0 |
| gnat family n-acetyltransferase | BK654_11740 | Not Available | Negative | 2710183 - 2710581 | 14860.7 |
| mfs transporter | BK654_11745 | Not Available | Positive | 2710845 - 2712506 | 58762.8 |
| imidazoleglycerol-phosphate dehydratase | BK654_11750 | Not Available | Positive | 2712795 - 2713388 | 21926.3 |
| imidazole glycerol phosphate synthase subunit hish | BK654_11755 | Not Available | Positive | 2713388 - 2714026 | 23397.8 |
| 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase | BK654_11760 | Not Available | Positive | 2714026 - 2714280 | 10042.9 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | BK654_11765 | Not Available | Positive | 2714323 - 2715060 | 25709.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
