Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deaminase | BK654_11605 | Not Available | Positive | 2681309 - 2681845 | 19667.4 |
| bifunctional antitoxin/transcriptional repressor relb | BK654_11610 | Not Available | Positive | 2682442 - 2682681 | 8983.86 |
| transcriptional regulator | BK654_11630 | Not Available | Positive | 2684280 - 2684573 | 11036.2 |
| hypothetical protein | BK654_11635 | Not Available | Negative | 2685048 - 2689622 | 171073.0 |
| integrase | BK654_11640 | Not Available | Negative | 2690431 - 2691414 | 36946.7 |
| hypothetical protein | BK654_11645 | Not Available | Negative | 2692046 - 2692768 | 27043.8 |
| Trna-thr | Not Available | Not Available | Positive | 2693466 - 2693541 | Not Available |
| sam-dependent methyltransferase | BK654_11655 | Not Available | Negative | 2694028 - 2695260 | 45951.0 |
| abc transporter permease | BK654_11660 | Not Available | Negative | 2695241 - 2695930 | 25640.3 |
| abc transporter permease | BK654_11665 | Not Available | Negative | 2695927 - 2696622 | 25058.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
