Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-cysteine desulfhydrase | BK654_11355 | Not Available | Negative | 2627323 - 2628315 | 35161.3 |
| choline transporter | BK654_11360 | Not Available | Positive | 2628727 - 2630727 | 73443.7 |
| 3-ketoacyl-acp reductase | BK654_11365 | Not Available | Negative | 2630740 - 2631480 | 26233.4 |
| lysr family transcriptional regulator | BK654_11370 | Not Available | Positive | 2631612 - 2632502 | 33334.4 |
| l-glyceraldehyde 3-phosphate reductase | BK654_11375 | Not Available | Positive | 2632702 - 2633739 | 38104.2 |
| taurine dioxygenase | BK654_11380 | Not Available | Negative | 2633903 - 2634751 | 32050.1 |
| taurine abc transporter permease | BK654_11385 | Not Available | Negative | 2634802 - 2635641 | 29641.1 |
| taurine transporter atp-binding subunit | BK654_11390 | Not Available | Negative | 2635638 - 2636432 | 28824.9 |
| taurine abc transporter substrate-binding protein | BK654_11395 | Not Available | Negative | 2636458 - 2637435 | 34540.5 |
| glutamate--cysteine ligase | BK654_11400 | Not Available | Negative | 2637735 - 2639318 | 59067.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
