Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plp-dependent threonine dehydratase | BK654_11255 | Not Available | Negative | 2606366 - 2607880 | 54849.7 |
| ribose 5-phosphate isomerase a | BK654_11260 | Not Available | Positive | 2608040 - 2608714 | 23353.2 |
| dna-binding protein | BK654_11265 | Not Available | Negative | 2608856 - 2609770 | 34368.2 |
| dna-binding protein | BK654_11270 | Not Available | Negative | 2609889 - 2610818 | 34711.5 |
| hypothetical protein | BK654_11275 | Not Available | Negative | 2611054 - 2611719 | 23540.3 |
| fad-binding oxidoreductase | BK654_11280 | Not Available | Negative | 2611763 - 2613157 | 51016.8 |
| d-3-phosphoglycerate dehydrogenase | BK654_11285 | Not Available | Positive | 2613364 - 2614593 | 44310.5 |
| atpase | BK654_11290 | Not Available | Negative | 2614804 - 2615229 | 14618.8 |
| abc transporter substrate-binding protein | BK654_11295 | Not Available | Positive | 2615363 - 2615929 | 20706.6 |
| sam-dependent methyltransferase | BK654_11300 | Not Available | Negative | 2616104 - 2616730 | 23165.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
