Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-amino-acid oxidase | BK664_29615 | Not Available | Negative | 6427885 - 6429000 | 39516.5 |
| hydroxyproline-2-epimerase | BK664_29620 | Not Available | Negative | 6428997 - 6429929 | 33091.2 |
| gntr family transcriptional regulator | BK664_29625 | Not Available | Negative | 6430044 - 6430724 | 25708.0 |
| d-alanyl-d-alanine dipeptidase | BK664_29630 | Not Available | Negative | 6430815 - 6432239 | 52705.7 |
| hypothetical protein | BK664_29635 | Not Available | Negative | 6432733 - 6433665 | 33557.9 |
| amino acid permease | BK664_29640 | Not Available | Negative | 6433719 - 6435284 | 56023.6 |
| alcohol dehydrogenase | BK664_29645 | Not Available | Negative | 6435439 - 6436599 | 40921.6 |
| aldehyde dehydrogenase | BK664_29650 | Not Available | Negative | 6436603 - 6437994 | 50020.9 |
| glutamine synthetase | BK664_29655 | Not Available | Negative | 6438005 - 6439378 | 52054.9 |
| alkylhydroperoxidase | BK664_29660 | Not Available | Positive | 6439591 - 6439908 | 11430.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
