Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrate abc transporter substrate-binding protein | BK654_11050 | Not Available | Positive | 2552129 - 2553154 | 37000.0 |
| sulfonate abc transporter atp-binding protein | BK654_11055 | Not Available | Positive | 2553160 - 2554020 | 31672.4 |
| abc transporter permease | BK654_11060 | Not Available | Positive | 2554033 - 2554899 | 31958.1 |
| hypothetical protein | BK654_11065 | Not Available | Negative | 2555052 - 2555423 | 13298.7 |
| cell division protein | BK654_11070 | Not Available | Positive | 2556047 - 2556535 | 18035.1 |
| tigr01777 family protein | BK654_11075 | Not Available | Positive | 2556528 - 2557970 | 52334.9 |
| alpha/beta hydrolase | BK654_11080 | Not Available | Positive | 2557980 - 2560430 | 90791.5 |
| hypothetical protein | BK654_11085 | Not Available | Positive | 2560675 - 2560950 | 10355.7 |
| efflux transporter periplasmic adaptor subunit | BK654_11090 | Not Available | Positive | 2561345 - 2562124 | 27908.2 |
| hlyd family secretion protein | BK654_11095 | Not Available | Positive | 2562121 - 2563440 | 47920.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
