Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | BK654_10990 | Not Available | Negative | 2532003 - 2532635 | 23903.8 |
| efflux transporter periplasmic adaptor subunit | BK654_10995 | Not Available | Positive | 2532899 - 2534056 | 41087.0 |
| multidrug efflux rnd transporter permease | BK654_11000 | Not Available | Positive | 2534060 - 2537224 | 113255.0 |
| multidrug transporter | BK654_11005 | Not Available | Positive | 2537221 - 2538678 | 52462.6 |
| hypothetical protein | BK654_11010 | Not Available | Negative | 2538742 - 2539107 | 13282.6 |
| porin | BK654_11015 | Not Available | Positive | 2540424 - 2541677 | 45713.4 |
| channel protein tolc | BK654_11030 | Not Available | Positive | 2545918 - 2547267 | 49581.4 |
| abc transporter | BK654_11035 | Not Available | Positive | 2547305 - 2549461 | 78644.9 |
| hemolysin secretion protein d | BK654_11040 | Not Available | Positive | 2549451 - 2550818 | 50338.8 |
| taurine dioxygenase | BK654_11045 | Not Available | Positive | 2551179 - 2552090 | 33957.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
