Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK664_26820 | Not Available | Positive | 5808010 - 5808369 | 12960.2 |
| ggdef domain-containing protein | BK664_26825 | Not Available | Negative | 5808723 - 5811743 | 112887.0 |
| sugar abc transporter substrate-binding protein | BK664_26830 | Not Available | Negative | 5811731 - 5812750 | 36184.1 |
| hypothetical protein | BK664_26835 | Not Available | Negative | 5813126 - 5813929 | 29306.2 |
| lysr family transcriptional regulator | BK664_26840 | Not Available | Negative | 5814022 - 5814969 | 34722.3 |
| porin | BK664_26845 | Not Available | Positive | 5815236 - 5816498 | 46143.0 |
| transporter | BK664_26850 | Not Available | Positive | 5816635 - 5816850 | 7647.41 |
| lysr family transcriptional regulator | BK664_26855 | Not Available | Negative | 5816886 - 5817755 | 32344.1 |
| amino acid abc transporter | BK664_26860 | Not Available | Positive | 5818008 - 5818850 | 30197.5 |
| amino acid abc transporter | BK664_26865 | Not Available | Positive | 5818922 - 5819773 | 30717.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
