Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase subunit sigma | BK664_26655 | Not Available | Negative | 5777280 - 5777792 | 19182.1 |
| metallophosphoesterase | BK664_26660 | Not Available | Positive | 5777947 - 5778915 | 34966.4 |
| amidase | BK664_26665 | Not Available | Positive | 5778929 - 5779237 | 11533.1 |
| rieske (2fe-2s) protein | BK664_26675 | Not Available | Positive | 5780818 - 5781981 | 44218.8 |
| carboxymuconolactone decarboxylase | BK664_26680 | Not Available | Negative | 5782020 - 5782676 | 23190.3 |
| hypothetical protein | BK664_26685 | Not Available | Negative | 5782887 - 5783165 | 10119.3 |
| arac family transcriptional regulator | BK664_26690 | Not Available | Positive | 5783259 - 5784038 | 28426.1 |
| diaminopimelate epimerase | BK664_26695 | Not Available | Positive | 5784083 - 5785075 | 34979.5 |
| cytosine deaminase | BK664_26700 | Not Available | Negative | 5785134 - 5786381 | 46258.2 |
| cytosine permease | BK664_26705 | Not Available | Negative | 5786395 - 5787666 | 44695.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
