Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hybrid sensor histidine kinase/response regulator | BK664_26555 | Not Available | Positive | 5756122 - 5759340 | 118748.0 |
| 2,5-didehydrogluconate reductase b | BK664_26560 | Not Available | Negative | 5759344 - 5760147 | 29387.3 |
| thioesterase | BK664_26565 | Not Available | Negative | 5760332 - 5760871 | 19062.8 |
| lysr family transcriptional regulator | BK664_26570 | Not Available | Negative | 5760971 - 5761879 | 33492.8 |
| quercetin 2,3-dioxygenase | BK664_26575 | Not Available | Positive | 5761984 - 5762850 | 31348.2 |
| hydrolase | BK664_26580 | Not Available | Positive | 5762979 - 5763605 | 22972.4 |
| mechanosensitive ion channel protein mscs | BK664_26585 | Not Available | Positive | 5763788 - 5765230 | 52603.4 |
| alkylhydroperoxidase | BK664_26590 | Not Available | Positive | 5765378 - 5765818 | 16449.8 |
| emrb/qaca family drug resistance transporter | BK664_26595 | Not Available | Negative | 5765819 - 5767411 | 57171.4 |
| hemolysin d | BK664_26600 | Not Available | Negative | 5767408 - 5768529 | 39644.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
