Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK654_10835 | Not Available | Positive | 2498370 - 2498780 | 14735.6 |
| calcium-binding protein | BK654_10840 | Not Available | Negative | 2499105 - 2502476 | 113286.0 |
| hypothetical protein | BK654_10850 | Not Available | Positive | 2504913 - 2505317 | 14997.3 |
| nad(p)-dependent oxidoreductase | BK654_10855 | Not Available | Negative | 2505364 - 2506272 | 32252.5 |
| duf305 domain-containing protein | BK654_10860 | Not Available | Negative | 2506348 - 2506851 | 18233.8 |
| diguanylate cyclase | BK654_10865 | Not Available | Negative | 2507123 - 2508472 | 49700.6 |
| glutathione transferase | BK654_10870 | Not Available | Negative | 2508627 - 2509043 | 15356.3 |
| 2-amino-3-ketobutyrate coa ligase | BK654_10875 | Not Available | Positive | 2509308 - 2510543 | 44808.7 |
| mfs transporter | BK654_10880 | Not Available | Positive | 2510556 - 2511719 | 40525.8 |
| l-threonine dehydrogenase | BK654_10885 | Not Available | Negative | 2511716 - 2512864 | 40028.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
