Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrilase family protein | BK664_26245 | Not Available | Positive | 5682760 - 5683551 | 29842.3 |
| 2-isopropylmalate synthase | BK664_26250 | Not Available | Negative | 5683710 - 5685389 | 61840.1 |
| hypothetical protein | BK664_26255 | Not Available | Positive | 5685788 - 5686144 | 13705.2 |
| peptidase m23 | BK664_26260 | Not Available | Negative | 5686265 - 5687086 | 29405.5 |
| exodeoxyribonuclease vii large subunit | BK664_26265 | Not Available | Negative | 5687090 - 5688469 | 51309.4 |
| permease | BK664_26270 | Not Available | Positive | 5688667 - 5689434 | 27399.0 |
| sugar abc transporter atpase | BK664_26275 | Not Available | Positive | 5689602 - 5690150 | 20416.4 |
| imp dehydrogenase | BK664_26280 | Not Available | Positive | 5690268 - 5691737 | 51971.8 |
| glutamine-hydrolyzing gmp synthase | BK664_26285 | Not Available | Positive | 5691835 - 5693412 | 58208.1 |
| hypothetical protein | BK664_26290 | Not Available | Positive | 5693622 - 5695604 | 73138.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
