Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (cytosine(32)/uridine(32)-2'-o)-methyltransferase trmj | BK664_26145 | Not Available | Positive | 5664754 - 5665524 | 28323.0 |
| serine o-acetyltransferase | BK664_26150 | Not Available | Positive | 5665527 - 5666303 | 27842.5 |
| fe-s cluster assembly transcriptional regulator iscr | BK664_26155 | Not Available | Positive | 5666570 - 5667061 | 17985.4 |
| iscs subfamily cysteine desulfurase | BK664_26160 | Not Available | Positive | 5667112 - 5668326 | 44655.4 |
| fe-s cluster assembly scaffold iscu | BK664_26165 | Not Available | Positive | 5668409 - 5668795 | 13871.7 |
| iron-sulfur cluster assembly protein isca | BK664_26170 | Not Available | Positive | 5668830 - 5669153 | 11597.7 |
| co-chaperone hscb | BK664_26175 | Not Available | Positive | 5669162 - 5669683 | 20091.7 |
| fe-s protein assembly chaperone hsca | BK664_26180 | Not Available | Positive | 5669735 - 5671597 | 66088.0 |
| ferredoxin, 2fe-2s type, isc system | BK664_26185 | Not Available | Positive | 5671600 - 5671941 | 12407.6 |
| fe-s assembly protein iscx | BK664_26190 | Not Available | Positive | 5671956 - 5672156 | 7489.83 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
