Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK664_26095 | Not Available | Negative | 5654831 - 5655136 | 11736.2 |
| integrase | BK664_26100 | Not Available | Negative | 5655951 - 5657192 | 45944.2 |
| Trna-leu | Not Available | Not Available | Positive | 5657357 - 5657441 | Not Available |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | BK664_26110 | Not Available | Positive | 5657549 - 5658598 | 38440.0 |
| trna guanosine(34) transglycosylase tgt | BK664_26115 | Not Available | Positive | 5658595 - 5659728 | 41789.6 |
| preprotein translocase subunit yajc | BK664_26120 | Not Available | Positive | 5659772 - 5660110 | 11968.8 |
| protein-export membrane protein secd | BK664_26125 | Not Available | Positive | 5660174 - 5662042 | 67146.5 |
| protein-export membrane protein secf | BK664_26130 | Not Available | Positive | 5662052 - 5662966 | 33090.6 |
| hypothetical protein | BK664_26135 | Not Available | Positive | 5663087 - 5663638 | 19073.8 |
| inositol monophosphatase | BK664_26140 | Not Available | Negative | 5663792 - 5664607 | 29577.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
