Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxymethylenebutenolidase | BK664_25995 | Not Available | Positive | 5632807 - 5633505 | 25395.8 |
| aliphatic nitrilase | BK664_26000 | Not Available | Negative | 5633559 - 5634533 | 35223.2 |
| arac family transcriptional regulator | BK664_26005 | Not Available | Negative | 5634637 - 5635569 | 33719.6 |
| hypothetical protein | BK664_26010 | Not Available | Negative | 5635724 - 5635924 | 7742.36 |
| hypothetical protein | BK664_26015 | Not Available | Positive | 5636099 - 5636584 | 17674.4 |
| c4-dicarboxylate transporter dcta | BK664_26020 | Not Available | Negative | 5636628 - 5637983 | 47615.9 |
| tartrate dehydrogenase | BK664_26025 | Not Available | Negative | 5638072 - 5639127 | 38194.7 |
| lysr family transcriptional regulator | BK664_26030 | Not Available | Positive | 5639266 - 5640189 | 34446.3 |
| hypothetical protein | BK664_26035 | Not Available | Positive | 5640328 - 5640756 | 15129.3 |
| hypothetical protein | BK664_26040 | Not Available | Positive | 5640930 - 5641151 | 8579.39 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
