Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK664_25895 | Not Available | Positive | 5615385 - 5615645 | 8803.27 |
| hypothetical protein | BK664_25900 | Not Available | Negative | 5616052 - 5616420 | 13742.2 |
| lysr family transcriptional regulator | BK664_25905 | Not Available | Negative | 5616508 - 5617455 | 34419.4 |
| epimerase | BK664_25910 | Not Available | Positive | 5617568 - 5618467 | 32751.1 |
| cysteine protease | BK664_25915 | Not Available | Positive | 5618597 - 5620828 | 81638.3 |
| dna topoisomerase iii | BK664_25920 | Not Available | Positive | 5620947 - 5622896 | 70907.5 |
| glutathione s-transferase | BK664_25925 | Not Available | Positive | 5622975 - 5623607 | 23455.0 |
| gnat family n-acetyltransferase | BK664_25930 | Not Available | Positive | 5623652 - 5624155 | 19320.9 |
| hypothetical protein | BK664_25935 | Not Available | Positive | 5624675 - 5625004 | 12555.9 |
| hypothetical protein | BK664_25940 | Not Available | Positive | 5625129 - 5625431 | 10418.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
