Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| long-chain acyl-coa synthetase | BK664_25845 | Not Available | Positive | 5603607 - 5605088 | 54349.9 |
| biliverdin-producing heme oxygenase | BK664_25850 | Not Available | Positive | 5605085 - 5605759 | 25394.2 |
| short chain dehydrogenase | BK664_25855 | Not Available | Positive | 5605746 - 5606555 | 29168.5 |
| hypothetical protein | BK664_25860 | Not Available | Positive | 5606552 - 5607196 | 23523.8 |
| dna-binding response regulator | BK664_25865 | Not Available | Positive | 5607208 - 5607870 | 24648.7 |
| two-component sensor histidine kinase | BK664_25870 | Not Available | Positive | 5607867 - 5609285 | 52187.9 |
| lysr family transcriptional regulator | BK664_25875 | Not Available | Negative | 5609516 - 5610400 | 33060.0 |
| choline dehydrogenase | BK664_25880 | Not Available | Positive | 5610522 - 5612240 | 62181.2 |
| mfs transporter | BK664_25885 | Not Available | Positive | 5612324 - 5613946 | 58783.7 |
| alpha-hydroxy-acid oxidizing enzyme | BK664_25890 | Not Available | Positive | 5614048 - 5615190 | 41451.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
