Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain-containing protein | BK654_10775 | Not Available | Positive | 2490304 - 2491035 | 27363.4 |
| helicase | BK654_10780 | Not Available | Positive | 2491028 - 2491246 | 7714.31 |
| 16s rrna pseudouridine(516) synthase | BK654_10785 | Not Available | Positive | 2491282 - 2491974 | 26616.0 |
| alpha/beta hydrolase | BK654_10790 | Not Available | Positive | 2492286 - 2493170 | 33252.5 |
| Trna-gly | Not Available | Not Available | Positive | 2493335 - 2493408 | Not Available |
| dna-binding protein | BK654_10800 | Not Available | Positive | 2494013 - 2494486 | 17541.1 |
| pin domain-containing protein | BK654_10805 | Not Available | Positive | 2494483 - 2495058 | 21761.0 |
| hypothetical protein | BK654_10810 | Not Available | Negative | 2495533 - 2495727 | 7334.93 |
| hypothetical protein | BK654_10815 | Not Available | Positive | 2496186 - 2496485 | 11233.3 |
| lysine transporter lyse | BK654_10825 | Not Available | Positive | 2497229 - 2497858 | 22416.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
