Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | BK664_25745 | Not Available | Positive | 5586516 - 5587397 | 33010.0 |
| 3-beta hydroxysteroid dehydrogenase | BK664_25750 | Not Available | Negative | 5587505 - 5588119 | 21581.6 |
| mekhla domain-containing protein | BK664_25755 | Not Available | Negative | 5588354 - 5588833 | 17976.0 |
| lysr family transcriptional regulator | BK664_25760 | Not Available | Negative | 5588915 - 5589796 | 32576.7 |
| d-cysteine desulfhydrase | BK664_25765 | Not Available | Positive | 5589936 - 5590967 | 35985.2 |
| hypothetical protein | BK664_25770 | Not Available | Positive | 5591056 - 5591280 | 8216.8 |
| hypothetical protein | BK664_25775 | Not Available | Positive | 5591277 - 5591612 | 11874.1 |
| peptidylprolyl isomerase | BK664_25780 | Not Available | Negative | 5591717 - 5592055 | 12371.9 |
| peptidase m4 family protein | BK664_25785 | Not Available | Positive | 5592202 - 5593266 | 38720.8 |
| hypothetical protein | BK664_25790 | Not Available | Positive | 5593263 - 5593586 | 12050.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
