Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK664_25540 | Not Available | Positive | 5547651 - 5548346 | 25605.3 |
| porin | BK664_25545 | Not Available | Positive | 5548631 - 5549926 | 47195.1 |
| marr family transcriptional regulator | BK664_25550 | Not Available | Negative | 5550124 - 5550507 | 14642.8 |
| 12-oxophytodienoate reductase | BK664_25555 | Not Available | Positive | 5550610 - 5551728 | 40680.0 |
| zinc/iron-chelating domain-containing protein | BK664_25560 | Not Available | Positive | 5552276 - 5553019 | 27296.6 |
| lysr family transcriptional regulator | BK664_25565 | Not Available | Negative | 5553511 - 5554434 | 34633.4 |
| aminomethyltransferase | BK664_25570 | Not Available | Negative | 5554510 - 5555142 | 22826.6 |
| hypothetical protein | BK664_25575 | Not Available | Negative | 5555484 - 5555723 | 8873.69 |
| amino acid transporter | BK664_25580 | Not Available | Positive | 5555877 - 5557295 | 50238.3 |
| glutamyl-trna amidotransferase | BK664_25585 | Not Available | Negative | 5557344 - 5558678 | 47352.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
