Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | BK664_25490 | Not Available | Negative | 5535366 - 5536385 | 37472.8 |
| hypothetical protein | BK664_25495 | Not Available | Positive | 5536479 - 5537228 | 27932.5 |
| mfs transporter | BK664_25500 | Not Available | Negative | 5537481 - 5538914 | 51471.7 |
| aldehyde dehydrogenase (nadp(+)) | BK664_25505 | Not Available | Negative | 5539245 - 5540825 | 55287.1 |
| galactonate dehydratase | BK664_25510 | Not Available | Negative | 5540885 - 5542432 | 54669.1 |
| lysr family transcriptional regulator | BK664_25515 | Not Available | Negative | 5542554 - 5543534 | 37218.3 |
| fumarylacetoacetate hydrolase | BK664_25520 | Not Available | Positive | 5543655 - 5544833 | 42010.3 |
| iclr family transcriptional regulator | BK664_25525 | Not Available | Positive | 5545123 - 5545929 | 28981.3 |
| 2-keto-4-pentenoate hydratase | BK664_25530 | Not Available | Positive | 5545926 - 5546732 | 28323.0 |
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | BK664_25535 | Not Available | Positive | 5546736 - 5547629 | 31838.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
