Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ketodeoxygluconokinase | BK664_25315 | Not Available | Positive | 5491884 - 5492816 | 33560.8 |
| peptidylprolyl isomerase | BK664_25320 | Not Available | Negative | 5492958 - 5493233 | 10153.5 |
| hybrid sensor histidine kinase/response regulator | BK664_25325 | Not Available | Negative | 5493300 - 5495837 | 94024.0 |
| type iv pili twitching motility protein pilt | BK664_25330 | Not Available | Positive | 5495958 - 5497067 | 41245.7 |
| acetoacetate--coa ligase | BK664_25335 | Not Available | Negative | 5497183 - 5499138 | 72627.6 |
| 3-hydroxybutyrate dehydrogenase | BK664_25340 | Not Available | Negative | 5499281 - 5500054 | 26891.3 |
| transporter | BK664_25345 | Not Available | Negative | 5500062 - 5501453 | 48725.9 |
| sigma-54-dependent fis family transcriptional regulator | BK664_25350 | Not Available | Negative | 5501761 - 5503176 | 51867.7 |
| microcin abc transporter atp-binding protein | BK664_25355 | Not Available | Negative | 5503173 - 5504756 | 57993.9 |
| abc transporter permease | BK664_25360 | Not Available | Negative | 5504771 - 5505793 | 38000.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
