Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | BK664_25265 | Not Available | Positive | 5483758 - 5484624 | 31511.1 |
| thiol reductase thioredoxin | BK664_25270 | Not Available | Negative | 5484705 - 5485148 | 16782.5 |
| hypothetical protein | BK664_25275 | Not Available | Negative | 5485252 - 5485656 | 14299.0 |
| abc transporter substrate-binding protein | BK664_25280 | Not Available | Positive | 5486086 - 5486934 | 30855.7 |
| amino acid abc transporter permease | BK664_25285 | Not Available | Positive | 5486987 - 5487649 | 24372.7 |
| abc transporter permease | BK664_25290 | Not Available | Positive | 5487659 - 5488321 | 24372.4 |
| atp-binding protein | BK664_25295 | Not Available | Positive | 5488318 - 5489130 | 30201.8 |
| reactive intermediate/imine deaminase | BK664_25300 | Not Available | Positive | 5489175 - 5489564 | 14179.9 |
| iclr family transcriptional regulator | BK664_25305 | Not Available | Positive | 5489722 - 5490486 | 28493.0 |
| amino acid deaminase | BK664_25310 | Not Available | Positive | 5490526 - 5491743 | 43518.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
