Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf305 domain-containing protein | BK664_25110 | Not Available | Negative | 5443020 - 5443541 | 18563.0 |
| hypothetical protein | BK664_25115 | Not Available | Positive | 5443759 - 5444001 | 9038.89 |
| gluconolactonase | BK664_25125 | Not Available | Negative | 5444475 - 5445566 | 39248.4 |
| sterol desaturase | BK664_25130 | Not Available | Negative | 5445563 - 5446708 | 44068.3 |
| lysr family transcriptional regulator | BK664_25135 | Not Available | Negative | 5446815 - 5447678 | 32530.9 |
| hypothetical protein | BK664_25140 | Not Available | Positive | 5448157 - 5449074 | 34299.1 |
| amidohydrolase | BK664_25145 | Not Available | Negative | 5449199 - 5451046 | 68268.2 |
| scp-2 family sterol carrier protein | BK664_25150 | Not Available | Negative | 5451354 - 5451668 | 11054.3 |
| histidine phosphatase family protein | BK664_25155 | Not Available | Negative | 5451733 - 5452443 | 26204.4 |
| protease sohb | BK664_25160 | Not Available | Positive | 5452647 - 5453669 | 38187.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
