Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-ethylammeline chlorohydrolase | BK664_25060 | Not Available | Negative | 5430074 - 5431561 | 54480.9 |
| cytosine deaminase | BK664_25065 | Not Available | Negative | 5431558 - 5432754 | 43613.6 |
| spermidine/putrescine abc transporter substrate-binding protein | BK664_25070 | Not Available | Negative | 5432913 - 5433965 | 39316.7 |
| spermidine/putrescine abc transporter permease potc | BK664_25075 | Not Available | Negative | 5433980 - 5434768 | 28515.8 |
| abc transporter permease | BK664_25080 | Not Available | Negative | 5434765 - 5435682 | 33694.0 |
| spermidine/putrescine abc transporter atp-binding protein | BK664_25085 | Not Available | Negative | 5435684 - 5436769 | 39925.6 |
| gntr family transcriptional regulator | BK664_25090 | Not Available | Positive | 5436910 - 5437599 | 25746.8 |
| hybrid sensor histidine kinase/response regulator | BK664_25095 | Not Available | Positive | 5437793 - 5439904 | 77165.7 |
| excinuclease abc subunit a | BK664_25100 | Not Available | Positive | 5440066 - 5442687 | 94819.0 |
| hypothetical protein | BK664_25105 | Not Available | Positive | 5442780 - 5442968 | 6760.31 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
