Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | BK664_24960 | Not Available | Positive | 5410455 - 5411207 | 27908.7 |
| fumarate reductase/succinate dehydrogenase flavoprotein subunit | BK664_24965 | Not Available | Positive | 5411219 - 5412949 | 64477.7 |
| 4fe-4s ferredoxin | BK664_24970 | Not Available | Positive | 5412971 - 5413216 | 9126.12 |
| nitrate abc transporter substrate-binding protein | BK664_24975 | Not Available | Positive | 5413454 - 5414860 | 49930.4 |
| abc transporter permease | BK664_24980 | Not Available | Positive | 5414989 - 5415762 | 27417.3 |
| sulfonate abc transporter atp-binding protein | BK664_24985 | Not Available | Positive | 5415762 - 5416610 | 31714.9 |
| pbs lyase | BK664_24990 | Not Available | Positive | 5416607 - 5417569 | 34577.1 |
| hypothetical protein | BK664_24995 | Not Available | Positive | 5417566 - 5417853 | 10973.1 |
| repressor lexa | BK664_25000 | Not Available | Positive | 5418048 - 5418665 | 22335.1 |
| cdp-6-deoxy-delta-3,4-glucoseen reductase | BK664_25005 | Not Available | Positive | 5418665 - 5419282 | 21502.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
