Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK664_24645 | Not Available | Negative | 5360609 - 5360827 | 7811.23 |
| hypothetical protein | BK664_24915 | Not Available | Negative | 5402642 - 5402851 | 7629.19 |
| Trna-ser | Not Available | Not Available | Positive | 5403057 - 5403144 | Not Available |
| bax inhibitor protein | BK664_24925 | Not Available | Positive | 5403268 - 5403939 | 24277.0 |
| asnc family transcriptional regulator | BK664_24930 | Not Available | Negative | 5404005 - 5404442 | 16429.0 |
| eama family transporter | BK664_24935 | Not Available | Positive | 5404579 - 5405475 | 31772.9 |
| hypothetical protein | BK664_24940 | Not Available | Negative | 5405490 - 5406530 | 38118.0 |
| nadp-dependent glyceraldehyde-3-phosphate dehydrogenase | BK664_24945 | Not Available | Negative | 5406578 - 5408203 | 59666.7 |
| peroxidase | BK664_24950 | Not Available | Positive | 5408409 - 5409296 | 32076.2 |
| oxidoreductase | BK664_24955 | Not Available | Positive | 5409313 - 5410281 | 35552.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
