Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-aspartate oxidase | BK654_10675 | Not Available | Positive | 2466353 - 2467969 | 59541.8 |
| hypothetical protein | BK654_10680 | Not Available | Negative | 2467938 - 2468390 | 17313.3 |
| hypothetical protein | BK654_10685 | Not Available | Negative | 2468374 - 2468628 | 10274.5 |
| folate-binding protein ygfz | BK654_10690 | Not Available | Positive | 2468778 - 2469719 | 34003.0 |
| histidine kinase | BK654_10695 | Not Available | Positive | 2469755 - 2470576 | 30533.9 |
| histidine kinase | BK654_10700 | Not Available | Negative | 2470617 - 2472008 | 50811.1 |
| dna-binding response regulator | BK654_10705 | Not Available | Negative | 2472001 - 2472672 | 24628.8 |
| tricarboxylic transporter | BK654_10710 | Not Available | Positive | 2473128 - 2474120 | 35487.8 |
| hypothetical protein | BK654_10715 | Not Available | Positive | 2474176 - 2474637 | 16815.6 |
| tripartite tricarboxylate transporter tcta | BK654_10720 | Not Available | Positive | 2474639 - 2476153 | 53070.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
