Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK664_24495 | Not Available | Negative | 5337655 - 5337858 | 7345.72 |
| hypothetical protein | BK664_24500 | Not Available | Positive | 5338420 - 5338821 | 14897.8 |
| duf5064 domain-containing protein | BK664_24505 | Not Available | Negative | 5339678 - 5340040 | 13889.5 |
| carbamate kinase | BK664_24510 | Not Available | Negative | 5340104 - 5341033 | 32695.5 |
| ornithine carbamoyltransferase | BK664_24515 | Not Available | Negative | 5341213 - 5342223 | 37758.3 |
| arginine deiminase | BK664_24520 | Not Available | Negative | 5342294 - 5343550 | 46377.6 |
| arginine-ornithine antiporter | BK664_24525 | Not Available | Negative | 5343586 - 5345013 | 50977.9 |
| hypothetical protein | BK664_24530 | Not Available | Positive | 5345380 - 5345589 | 7347.98 |
| integrase | BK664_24535 | Not Available | Negative | 5345899 - 5346948 | 39915.4 |
| hypothetical protein | BK664_24540 | Not Available | Negative | 5346950 - 5347192 | 9203.05 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
