Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate-semialdehyde dehydrogenase (nadp(+)) | BK664_24445 | Not Available | Negative | 5326261 - 5327736 | 52263.8 |
| flavin reductase | BK664_24450 | Not Available | Negative | 5327883 - 5328368 | 17069.5 |
| carnitine dehydratase | BK664_24455 | Not Available | Negative | 5328381 - 5329862 | 53018.4 |
| alpha/beta hydrolase | BK664_24460 | Not Available | Negative | 5329859 - 5330692 | 29832.8 |
| peptide synthetase | BK664_24465 | Not Available | Negative | 5330736 - 5331326 | 21454.9 |
| dna-binding response regulator | BK664_24470 | Not Available | Negative | 5331516 - 5332148 | 23177.1 |
| histidine kinase | BK664_24475 | Not Available | Negative | 5332182 - 5333549 | 50760.2 |
| carbon starvation protein a | BK664_24480 | Not Available | Positive | 5334463 - 5336520 | 73465.0 |
| hypothetical protein | BK664_24485 | Not Available | Positive | 5336535 - 5336732 | 7580.15 |
| serine/threonine protein phosphatase | BK664_24490 | Not Available | Negative | 5336832 - 5337545 | 26891.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
