Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytosine permease | BK664_24390 | Not Available | Positive | 5316269 - 5317675 | 50413.3 |
| branched-chain amino acid abc transporter substrate-binding protein | BK664_24400 | Not Available | Negative | 5318579 - 5319733 | 41960.4 |
| polyamine abc transporter permease | BK664_24405 | Not Available | Negative | 5319751 - 5320560 | 29447.3 |
| abc transporter permease | BK664_24410 | Not Available | Negative | 5320567 - 5321511 | 33832.6 |
| abc transporter substrate-binding protein | BK664_24415 | Not Available | Negative | 5321508 - 5322533 | 36896.8 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | BK664_24420 | Not Available | Negative | 5322816 - 5323925 | 40112.2 |
| hypothetical protein | BK664_24425 | Not Available | Positive | 5323997 - 5324293 | 10980.9 |
| nudix hydrolase | BK664_24430 | Not Available | Negative | 5324468 - 5325031 | 21193.4 |
| gntr family transcriptional regulator | BK664_24435 | Not Available | Negative | 5325034 - 5325786 | 27892.8 |
| 4-carboxymuconolactone decarboxylase | BK664_24440 | Not Available | Negative | 5325875 - 5326264 | 14649.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
