Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catechol 1,2-dioxygenase | BK664_24290 | Not Available | Positive | 5300206 - 5301135 | 33983.6 |
| arac family transcriptional regulator | BK664_24295 | Not Available | Positive | 5301245 - 5302204 | 36375.6 |
| hypothetical protein | BK664_24300 | Not Available | Negative | 5302312 - 5302614 | 10275.4 |
| benzoate 1,2-dioxygenase large subunit | BK664_24305 | Not Available | Positive | 5302651 - 5304015 | 51770.5 |
| benzoate 1,2-dioxygenase small subunit | BK664_24310 | Not Available | Positive | 5304012 - 5304500 | 19500.8 |
| nadh oxidase | BK664_24315 | Not Available | Positive | 5304511 - 5305524 | 36518.2 |
| 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase | BK664_24320 | Not Available | Positive | 5305549 - 5306322 | 27809.2 |
| nudix hydrolase | BK664_24325 | Not Available | Negative | 5306328 - 5306690 | 13589.3 |
| duf2188 domain-containing protein | BK664_24330 | Not Available | Positive | 5306899 - 5307102 | 7299.82 |
| cell envelope protein smpa | BK664_24335 | Not Available | Negative | 5307160 - 5307510 | 12552.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
