Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfonate abc transporter substrate-binding protein | BK664_24240 | Not Available | Positive | 5291341 - 5292249 | 33010.7 |
| lysr family transcriptional regulator | BK664_24245 | Not Available | Negative | 5292268 - 5293182 | 33118.3 |
| citrate transporter | BK664_24250 | Not Available | Positive | 5293314 - 5294606 | 45494.0 |
| abc transporter substrate-binding protein | BK664_24255 | Not Available | Positive | 5294607 - 5295971 | 48053.4 |
| hypothetical protein | BK664_24260 | Not Available | Positive | 5295968 - 5296285 | 11568.0 |
| polysaccharide deacetylase | BK664_24265 | Not Available | Positive | 5296434 - 5297333 | 33136.5 |
| hypothetical protein | BK664_24270 | Not Available | Positive | 5297453 - 5297695 | 8763.79 |
| lysr family transcriptional regulator | BK664_24275 | Not Available | Negative | 5297692 - 5298576 | 32442.6 |
| muconate cycloisomerase | BK664_24280 | Not Available | Positive | 5298701 - 5299849 | 41032.7 |
| muconolactone delta-isomerase | BK664_24285 | Not Available | Positive | 5299860 - 5300150 | 11148.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
