Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine abc transporter permease | BK664_24190 | Not Available | Positive | 5282994 - 5283683 | 25019.4 |
| amino acid abc transporter permease | BK664_24195 | Not Available | Positive | 5283680 - 5284393 | 26823.9 |
| histidine/lysine/arginine/ornithine abc transporter atp-binding protein | BK664_24200 | Not Available | Positive | 5284415 - 5285182 | 28136.3 |
| diguanylate cyclase | BK664_24205 | Not Available | Positive | 5285360 - 5286937 | 57438.9 |
| hypothetical protein | BK664_24210 | Not Available | Negative | 5287017 - 5287391 | 14083.7 |
| 4-hydroxy-tetrahydrodipicolinate synthase | BK664_24215 | Not Available | Negative | 5287452 - 5288327 | 31304.1 |
| branched-chain amino acid abc transporter permease | BK664_24220 | Not Available | Positive | 5288746 - 5289444 | 24552.5 |
| branched-chain amino acid abc transporter | BK664_24225 | Not Available | Positive | 5289441 - 5289755 | 11962.3 |
| hypothetical protein | BK664_24230 | Not Available | Negative | 5290041 - 5290235 | 7190.38 |
| duf159 family protein | BK664_24235 | Not Available | Negative | 5290508 - 5291188 | 25285.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
