Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-(hydroxymethyl)glutathione synthase | BK664_24090 | Not Available | Negative | 5264061 - 5264639 | 20690.9 |
| rpir family transcriptional regulator | BK664_24095 | Not Available | Negative | 5265244 - 5266149 | 32715.4 |
| acyl-coa--6-aminopenicillanic acid acyl-transferase | BK664_24100 | Not Available | Negative | 5266337 - 5267386 | 37450.5 |
| glutamine abc transporter atp-binding protein | BK664_24105 | Not Available | Negative | 5267396 - 5268118 | 26178.0 |
| glutamine abc transporter permease glnp | BK664_24110 | Not Available | Negative | 5268115 - 5268771 | 23971.4 |
| glutamine abc transporter substrate-binding protein glnh | BK664_24115 | Not Available | Negative | 5268804 - 5269547 | 26948.2 |
| aspartate aminotransferase family protein | BK664_24120 | Not Available | Positive | 5269909 - 5271237 | 47701.3 |
| 4-carboxymuconolactone decarboxylase | BK664_24125 | Not Available | Positive | 5271250 - 5271813 | 21062.2 |
| hypothetical protein | BK664_24130 | Not Available | Positive | 5271987 - 5272334 | 12862.6 |
| is110 family transposase | BK664_24135 | Not Available | Positive | 5272589 - 5273692 | 40857.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
