Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-tetrahydrodipicolinate synthase | BK654_10625 | Not Available | Negative | 2456676 - 2457554 | 31480.3 |
| glycine cleavage system protein r | BK654_10630 | Not Available | Positive | 2457871 - 2458431 | 20641.7 |
| peroxiredoxin | BK654_10635 | Not Available | Positive | 2458442 - 2458915 | 17315.6 |
| ai-2e family transporter | BK654_10640 | Not Available | Negative | 2459046 - 2460116 | 39487.2 |
| response regulator sira | BK654_10645 | Not Available | Negative | 2460147 - 2460386 | 8671.33 |
| peptidase m48 | BK654_10650 | Not Available | Positive | 2460485 - 2461918 | 53036.4 |
| serine peptidase | BK654_10655 | Not Available | Negative | 2461982 - 2463409 | 50516.1 |
| rna polymerase subunit sigma | BK654_10660 | Not Available | Negative | 2463640 - 2464587 | 34440.9 |
| rna polymerase subunit sigma | BK654_10665 | Not Available | Negative | 2464597 - 2465181 | 20822.7 |
| rna polymerase sigma factor rpoe | BK654_10670 | Not Available | Negative | 2465212 - 2465793 | 22252.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
