Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| suppressor of fused protein (sufu) | BK664_23940 | Not Available | Negative | 5230784 - 5231617 | 30340.1 |
| hypothetical protein | BK664_23945 | Not Available | Negative | 5231712 - 5233190 | 55180.4 |
| cytosine permease | BK664_23950 | Not Available | Negative | 5233363 - 5234778 | 50077.2 |
| acetylornithine deacetylase (arge) | BK664_23955 | Not Available | Negative | 5235065 - 5236216 | 41638.8 |
| fimbrial assembly protein fima | BK664_23960 | Not Available | Negative | 5236213 - 5236890 | 23733.2 |
| enamine deaminase rida | BK664_23965 | Not Available | Negative | 5237045 - 5237461 | 15422.5 |
| fad-dependent oxidoreductase | BK664_23970 | Not Available | Negative | 5237486 - 5238796 | 47900.4 |
| hypothetical protein | BK664_23975 | Not Available | Positive | 5239197 - 5239859 | 23298.9 |
| polyphosphate kinase 2 | BK664_23980 | Not Available | Positive | 5239918 - 5240739 | 31676.5 |
| sodium-independent anion transporter | BK664_23985 | Not Available | Positive | 5240789 - 5242558 | 62334.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
