Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | BK664_23790 | Not Available | Positive | 5200607 - 5202010 | 50758.5 |
| phosphatase | BK664_23795 | Not Available | Positive | 5202319 - 5203254 | 33432.8 |
| cupin | BK664_23800 | Not Available | Positive | 5203835 - 5204275 | 15494.7 |
| mfs transporter | BK664_23805 | Not Available | Negative | 5204289 - 5205719 | 48855.6 |
| lysr family transcriptional regulator | BK664_23810 | Not Available | Positive | 5205854 - 5206744 | 32244.1 |
| diguanylate cyclase | BK664_23815 | Not Available | Positive | 5207227 - 5208615 | 52785.1 |
| n-acetylglucosaminyltransferase | BK664_23820 | Not Available | Positive | 5208621 - 5209949 | 50372.7 |
| hypothetical protein | BK664_23825 | Not Available | Positive | 5209952 - 5210800 | 31425.8 |
| hypothetical protein | BK664_23830 | Not Available | Positive | 5210807 - 5211922 | 41745.8 |
| nad-dependent dehydratase | BK664_23835 | Not Available | Positive | 5211926 - 5212873 | 34047.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
