Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 7-cyano-7-deazaguanine synthase quec | BK664_23735 | Not Available | Positive | 5190292 - 5190984 | 24436.9 |
| Trna-lys | Not Available | Not Available | Positive | 5191047 - 5191122 | Not Available |
| quinolinate synthase | BK664_23745 | Not Available | Positive | 5191394 - 5192452 | 38328.2 |
| hypothetical protein | BK664_23750 | Not Available | Negative | 5192516 - 5193004 | 18319.8 |
| cold-shock protein | BK664_23755 | Not Available | Negative | 5193101 - 5193313 | 7695.06 |
| glycine cleavage system protein t | BK664_23760 | Not Available | Negative | 5193716 - 5194840 | 40112.8 |
| l-serine ammonia-lyase | BK664_23765 | Not Available | Negative | 5194879 - 5196255 | 48750.8 |
| lactate permease | BK664_23775 | Not Available | Negative | 5197333 - 5199096 | 62771.8 |
| hypothetical protein | BK664_23780 | Not Available | Positive | 5199269 - 5199505 | 8866.57 |
| hypothetical protein | BK664_23785 | Not Available | Positive | 5199548 - 5199985 | 15682.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
