Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holliday junction dna helicase ruva | BK664_23685 | Not Available | Positive | 5182258 - 5182872 | 22364.4 |
| holliday junction dna helicase ruvb | BK664_23690 | Not Available | Positive | 5182873 - 5183937 | 39371.6 |
| tol-pal system-associated acyl-coa thioesterase | BK664_23695 | Not Available | Positive | 5184062 - 5184529 | 17479.9 |
| protein tolq | BK664_23700 | Not Available | Positive | 5184519 - 5185214 | 25434.6 |
| protein tolr | BK664_23705 | Not Available | Positive | 5185229 - 5185690 | 16611.5 |
| protein tola | BK664_23710 | Not Available | Positive | 5185690 - 5186769 | 39022.1 |
| tol-pal system beta propeller repeat protein tolb | BK664_23715 | Not Available | Positive | 5186766 - 5188067 | 47354.5 |
| peptidoglycan-associated lipoprotein | BK664_23720 | Not Available | Positive | 5188120 - 5188617 | 17719.8 |
| tol-pal system protein ybgf | BK664_23725 | Not Available | Positive | 5188624 - 5189475 | 29728.8 |
| 7-carboxy-7-deazaguanine synthase quee | BK664_23730 | Not Available | Positive | 5189643 - 5190290 | 24203.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
