Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mechanosensitive ion channel protein mscs | BK664_23635 | Not Available | Positive | 5173070 - 5173912 | 30377.2 |
| porin | BK664_23640 | Not Available | Negative | 5173977 - 5175308 | 47782.4 |
| hit family protein | BK664_23645 | Not Available | Positive | 5176226 - 5176651 | 16143.4 |
| hypothetical protein | BK664_23650 | Not Available | Positive | 5176655 - 5176861 | 7823.17 |
| cold-shock protein | BK664_23655 | Not Available | Negative | 5176932 - 5177534 | 21896.0 |
| aryl-sulfate sulfotransferase | BK664_23660 | Not Available | Positive | 5177998 - 5178336 | 12517.3 |
| fmdb family transcriptional regulator | BK664_23665 | Not Available | Positive | 5178473 - 5178694 | 7902.5 |
| aspartate--trna ligase | BK664_23670 | Not Available | Positive | 5178817 - 5180592 | 66256.6 |
| hypothetical protein | BK664_23675 | Not Available | Positive | 5180716 - 5181462 | 26504.1 |
| crossover junction endodeoxyribonuclease ruvc | BK664_23680 | Not Available | Positive | 5181617 - 5182141 | 18478.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
