Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | BK654_10575 | Not Available | Positive | 2448957 - 2449769 | 30818.5 |
| cupin | BK654_10580 | Not Available | Positive | 2449866 - 2450237 | 14119.7 |
| dioxygenase | BK654_10585 | Not Available | Negative | 2450280 - 2451050 | 28767.3 |
| chemotaxis protein | BK654_10590 | Not Available | Negative | 2451064 - 2452698 | 58224.1 |
| short-chain dehydrogenase | BK654_10595 | Not Available | Positive | 2453087 - 2453353 | 9843.87 |
| hypothetical protein | BK654_10600 | Not Available | Positive | 2453406 - 2453591 | 7012.64 |
| Trna-ser | Not Available | Not Available | Positive | 2453866 - 2453955 | Not Available |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | BK654_10610 | Not Available | Negative | 2454039 - 2454752 | 26877.5 |
| mbl fold metallo-hydrolase | BK654_10615 | Not Available | Negative | 2454780 - 2455538 | 27936.4 |
| hypothetical protein | BK654_10620 | Not Available | Negative | 2455543 - 2456658 | 40316.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
