Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rieske (2fe-2s) protein | BK664_23335 | Not Available | Negative | 5089843 - 5090160 | 11421.6 |
| hemin abc transporter substrate-binding protein | BK664_23340 | Not Available | Positive | 5090327 - 5091199 | 30850.5 |
| abc transporter permease | BK664_23345 | Not Available | Positive | 5091196 - 5092233 | 35549.9 |
| heme abc transporter atp-binding protein | BK664_23350 | Not Available | Positive | 5092233 - 5093000 | 27832.8 |
| iron(iii) abc transporter | BK664_23355 | Not Available | Positive | 5093021 - 5093872 | 31409.0 |
| camp-binding protein | BK664_23360 | Not Available | Negative | 5094106 - 5094906 | 29564.7 |
| competence protein tfox | BK664_23365 | Not Available | Negative | 5094922 - 5095194 | 10146.1 |
| hypothetical protein | BK664_23370 | Not Available | Negative | 5095438 - 5095782 | 12757.0 |
| hypothetical protein | BK664_23375 | Not Available | Negative | 5095874 - 5097430 | 57366.5 |
| penicillin-binding protein 1b | BK664_23380 | Not Available | Positive | 5097549 - 5099873 | 85091.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
