Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pantoate--beta-alanine ligase | BK664_23285 | Not Available | Negative | 5076870 - 5077730 | 30997.6 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | BK664_23290 | Not Available | Negative | 5077727 - 5078527 | 27933.2 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | BK664_23295 | Not Available | Negative | 5078892 - 5079383 | 18160.8 |
| poly(a) polymerase | BK664_23300 | Not Available | Negative | 5079387 - 5080787 | 53338.7 |
| response regulator | BK664_23305 | Not Available | Negative | 5081499 - 5082935 | 52360.5 |
| atpase | BK664_23310 | Not Available | Negative | 5082958 - 5085906 | 108037.0 |
| trna glutamyl-q(34) synthetase gluqrs | BK664_23315 | Not Available | Negative | 5086150 - 5087046 | 33410.9 |
| rna polymerase-binding protein dksa | BK664_23320 | Not Available | Negative | 5087186 - 5087629 | 17100.3 |
| aminotransferase | BK664_23325 | Not Available | Positive | 5087961 - 5089133 | 42623.9 |
| sugar fermentation stimulation protein sfsa | BK664_23330 | Not Available | Positive | 5089133 - 5089846 | 26212.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
